Publication Alert

Alternative Mechanisms for Coordinating Polymerase and MCM Helicase

Chanmi Lee, Ivan Liachko, Roxane Bouten, Zvi Kelman, and Bik K. Tye1

Molecular and Cellular Biology, January 2010, p. 423-435, Vol. 30, No. 2

no postings this week

Publication Alert

Activation of the S-Phase Checkpoint Inhibits Degradation of the F-Box Protein Dia2

Andrew C. Kile and Deanna M. Koepp

Molecular and Cellular Biology, January 2010, p. 160-171, Vol. 30, No. 1

Publication Alert

14-3-3 proteins function in the initiation and elongation steps of DNA replication in Saccharomyces cerevisiae

Wafaa Yahyaoui and Maria Zannis-Hadjopoulos

Journal of Cell Science 122, 4419-4426 (2009)

Publication Alert

Mechanistic analysis of PCNA poly-ubiquitylation by the ubiquitin protein ligases Rad18 and Rad5

Joanne L Parker and Helle D Ulrich

The EMBO Journal (2009) 28, 3657 – 3666

Publication Alert

Tipin/Tim1/And1 protein complex promotes Pol chromatin binding and sister chromatid cohesion

Alessia Errico, Claudia Cosentino, Teresa Rivera, Ana Losada, Etienne Schwob, Tim Hunt and Vincenzo Costanzo

The EMBO Journal (2009) 28, 3681 – 3692

Publication Alert

SCFDia2 regulates DNA replication forks during S-phase in budding yeast

Satoru Mimura, Makiko Komata2, Tsutomu Kishi, Katsuhiko Shirahige and Takumi Kamura

The EMBO Journal (2009) 28, 3693 – 3705

Publication Alert

Decreased replication origin activity in temporal transition regions

Zeqiang Guan, Christina M. Hughes, Settapong Kosiyatrakul, Paolo Norio, Ranjan Sen, Steven Fiering, C. David Allis, Eric E. Bouhassira, and Carl L. Schildkraut

The Journal of Cell Biology, Vol. 187, No. 5, 623-635

Publication Alert

Replication Protein A Stimulates the Werner Syndrome Protein Branch Migration Activity

Gregory Sow, Hong Wang, Dalyir Pretto, Walter J. Chazin and Patricia L. Opresko

The Journal of Biological Chemistry, 284, 34682-34691.

Publication Alert

A double-hexameric MCM2-7 complex is loaded onto origin DNA during licensing of eukaryotic DNA replication

Cecile Evrin, Pippa Clarke, Juergen Zech, Rudi Lurz, Jingchuan Sun, Stefan Uhlea, Huilin Li, Bruce Stillman and Christian Speck

PNAS December 1, 2009 vol. 106 no. 48 20240-20245

Publication Alert

The Amino-Terminal TPR Domain of Dia2 Tethers SCFDia2 to the Replisome Progression Complex

Hiroko Morohashi, Timurs Maculins and Karim Labib

Current Biology, Volume 19, Issue 22, 1943-1949, 12 November 2009

Publication Alert

PCNA Is Required for Initiation of Recombination-Associated DNA Synthesis by DNA Polymerase δ

Xuan Li1, Carrie M. Stith, Peter M. Burgers and Wolf-Dietrich Heyer

Molecular Cell, Volume 36, Issue 4, 704-713, 25 November 2009

Publication Alert

Csm3, Tof1, and Mrc1 Form a Heterotrimeric Mediator Complex That Associates with DNA Replication Forks

Masashige Bando, Yuki Katou, Makiko Komata, Hirokazu Tanaka, Takehiko Itoh, Takashi Sutani and Katsuhiko Shirahige

The Journal of Biological Chemistry, 284, 34355-34365.

Publication Alert

Quaternary structure of the human Cdt1-Geminin complex regulates DNA replication licensing

V. De Marco, P. J. Gillespie, A. Li, N. Karantzelis, E. Christodoulou, R. Klompmaker, S. van Gerwen, A. Fish, M. V. Petoukhov, M. S. Iliou, Z. Lygerou, R. H. Medema, J. J. Blow, D. I. Svergun, S. Taraviras and A. Perrakis

PNAS November 24, 2009 vol. 106 no. 47 19807-19812

Publication Alert

The Mechanistic Architecture of Thermostable Pyrococcus furiosus Family B DNA Polymerase Motif A and Its Interaction with the dNTP Substrate

Edward M. Kennedy, Christopher Hergott, Stephen Dewhurst and Baek Kim


Biochemistry, 2009, 48 (47), pp 11161–11168

Publication Alert

Reconstitution of Human Claspin-mediated Phosphorylation of Chk1 by the ATR (Ataxia Telangiectasia-mutated and Rad3-related) Checkpoint Kinase

Laura A. Lindsey-Boltz, Özdemirhan Serçin, Jun-Hyuk Choi and Aziz Sancar

The Journal of Biological Chemistry, 284, 33107-33114.

Publication Alert

Herpes Simplex Virus-1 DNA Primase: A Remarkably Inaccurate yet Selective Polymerase

Milan Urban, Nicolas Joubert, Michal Hocek, Richard E. Alexander and Robert D. Kuchta

Biochemistry, 2009, 48 (46), pp 10866–10881

Publication Alert

Putting Two Heads Together to Unwind DNA

Thomas J. Takara, 2 and Stephen P. Bell

Cell, Volume 139, Issue 4, 652-654, 13 November 2009

Publication Alert

Concerted Loading of Mcm2–7 Double Hexamers around DNA during DNA Replication Origin Licensing

Dirk Remus, Fabienne Beuron, Gökhan Tolun, Jack D. Griffith, Edward P. Morris and John F.X. Diffley,

Cell, Volume 139, Issue 4, 719-730, 05 November 2009

Publication Alert

Human RPA phosphorylation by ATR stimulates DNA synthesis and prevents ssDNA accumulation during DNA-replication stress

Vitaly M. Vassin, Rachel William Anantha, Elena Sokolova, Shlomo Kanner and James A. Borowiec

Journal of Cell Science 122, 4070-4080

Publication Alert

Structural Insights into Yeast DNA Polymerase δ by Small Angle X-ray Scattering

Rinku Jain, Michal Hamme, Robert E. Johnson, Louise Prakash, Satya Prakash and Aneel K. Aggarwal

Journal of Molecular Biology Volume 394, Issue 3, 4 December 2009, Pages 377-382

Publication Alert

Cohesin acetylation speeds the replication fork

Marie-Emilie Terret, Rebecca Sherwood, Sadia Rahman, Jun Qin2 & Prasad V. Jallepalli

Nature 462, 231-234 (12 November 2009)

Publication Alert

Translesion Synthesis of Abasic Sites by Yeast DNA Polymerase ϵ

Nasim Sabouri1 and Erik Johansson

The Journal of Biological Chemistry, 284, 31555-31563.

Publication Alert

Binding to PCNA in Euryarchaeal DNA Replication Requires Two PIP Motifs for DNA Polymerase D and One PIP Motif for DNA Polymerase B

Benoît Castrec, Christophe Rouillon, Ghislaine Henneke, Didier Flament, Joël Querellou, and Jean-Paul Raffin

Journal of Molecular Biology Volume 394, Issue 2, 27 November 2009, Pages 209-218

Publication Alert

Human Pif1 helicase unwinds synthetic DNA structures resembling stalled DNA replication forks

Tresa George, Qin Wen, Richard Griffiths, Anil Ganesh, Mark Meuth and Cyril M. Sanders

Nucleic Acids Research, 2009, Vol. 37, No. 19 6491-6502

Publication Alert

Drosophila RecQ4 Has a 3′-5′ DNA Helicase Activity That Is Essential for Viability*

Christopher Capp, Jianhong Wu and Tao-shih Hsieh

The Journal of Biological Chemistry, 284, 30845-30852.

Publication Alert

Herpes Simplex Virus-1 Helicase−Primase: Roles of Each Subunit in DNA Binding and Phosphodiester Bond Formation

Nisha A. Cavanaugh, Kathryn A. Ramirez-Aguilar, Milan Urban and Robert D. Kuchta

Biochemistry, 2009, 48 (43), pp 10199–10207

Publication Alert

Global Conformational Dynamics of a Y-Family DNA Polymerase during Catalysis

Cuiling Xu1, Brian A. Maxwell2, Jessica A. Brown1,3, Likui Zhang1, Zucai Suo

PLoS Biol 7(10): e1000225

Publication Alert

A Reduction in Ribonucleotide Reductase Activity Slows Down the Chromosome Replication Fork but Does Not Change Its Localization

Ingvild Odsbu, Morigen, Kirsten Skarstad

PLoS ONE 4(10): e7617

Publication Alert

Ionizing radiation-dependent and independent phosphorylation of the 32-kDa subunit of replication protein A during mitosis

Holger Stephan, Claire Concannon, Elisabeth Kremmer, Michael P. Carty and Heinz-Peter Nasheuer

Nucleic Acids Research, 2009, Vol. 37, No. 18 6028-6041

Publication Alert

Open chromatin encoded in DNA sequence is the signature of ‘master’ replication origins in human cells

Benjamin Audit, Lamia Zaghloul, Cédric Vaillant, Guillaume Chevereau, Yves d'Aubenton-Carafa, Claude Thermes and Alain Arneodo

Nucleic Acids Research, 2009, Vol. 37, No. 18 6064-6075

Publication Alert

Aberrant DNA Polymerase α Is Excluded from the Nucleus by Defective Import and Degradation in the Nucleus

Christian S. Eichinger, Takeshi Mizuno, Keiko Mizuno, Yasuyuki Miyake, Ken-ichiro Yanagi, Naoko Imamoto and Fumio Hanaoka

The Journal of Biological Chemistry, 284, 30604-30614.

Publication Alert

Protein Phosphatase 2A-Dependent Dephosphorylation of Replication Protein A Is Required for the Repair of DNA Breaks Induced by Replication Stress

Junjie Feng, Timothy Wakeman, Sheila Yong, Xiaohua Wu, Sally Kornbluth and Xiao-Fan Wang

Molecular and Cellular Biology, November 2009, p. 5696-5709, Vol. 29, No. 21

Publication Alert

HOXD13 Binds DNA Replication Origins To Promote Origin Licensing and Is Inhibited by Geminin

Valentina Salsi, Silvia Ferrari, Roberta Ferraresi, Andrea Cossarizza, Alexis Grande, and Vincenzo Zappavigna

Molecular and Cellular Biology, November 2009, p. 5775-5788, Vol. 29, No. 21

Publication Alert

The annealing helicase HARP protects stalled replication forks

Jingsong Yuan, Gargi Ghosa and Junjie Chen

Genes & Dev. 2009. 23: 2394-2399

Publication Alert

The annealing helicase HARP is recruited to DNA repair sites via an interaction with RPA

Timur Yusufzai, Xiangduo Kong, Kyoko Yokomori and James T. Kadonaga

Genes & Dev. 2009. 23: 2400-2404

Publication Alert

The annealing helicase SMARCAL1 maintains genome integrity at stalled replication forks

Carol E. Bansbach, Rémy Bétous, Courtney A. Lovejoy, Gloria G. Glick and David Cortez

Genes & Dev. 2009. 23: 2405-2414

Publication Alert

The SIOD disorder protein SMARCAL1 is an RPA-interacting protein involved in replication fork restart

Alberto Ciccia1, Andrea L. Bredemeyer, Mathew E. Sowa, Marie-Emilie Terret, Prasad V. Jallepalli, J. Wade Harper and Stephen J. Elledge

Genes & Dev. 2009. 23: 2415-2425

Publication Alert

Transient dsDNA breaks during pre-replication complex assembly

Emmanouil Rampakakis and Maria Zannis-Hadjopoulos

Nucleic Acids Research, 2009, Vol. 37, No. 17 5714-5724

Publication Alert

Fragile Genomic Sites Are Associated with Origins of Replication

Sara C. Di Rienzi, David Collingwood, M. K. Raghuraman and Bonita J. Brewer

Genome Biology and Evolution (2009) Vol. 2009:350

Publication Alert

A key role for Ctf4 in coupling the MCM2-7 helicase to DNA polymerase within the eukaryotic replisome

Agnieszka Gambus, Frederick van Deursen, Dimitrios Polychronopoulos, Magdalena Foltman, Richard C Jones, Ricky D Edmondson, Arturo Calzada and Karim Labib

The EMBO Journal (2009) 28, 2992 – 3004

Publication Alert

MCM10 mediates RECQ4 association with MCM2-7 helicase complex during DNA replication

Xiaohua Xu, Patrick J Rochette, Eminet A Feyissa, Tina V Su and Yilun Liu

The EMBO Journal (2009) 28, 3005 – 3014

Publication Alert

Tim–Tipin dysfunction creates an indispensible reliance on the ATR–Chk1 pathway for continued DNA synthesis

Kevin D. Smith, Michael A. Fu, and Eric J. Brown

The Journal of Cell Biology, Vol. 187, No. 1, 15-23

Publication Alert

Dbf4-Cdc7 Phosphorylation of Mcm2 Is Required for Cell Growth

Irina Bruck and Daniel Kaplan

The Journal of Biological Chemistry, 284, 28823-28831.

Publication Alert

DNA polymerase ε and δ proofreading suppress discrete mutator and cancer phenotypes in mice

Tina M. Albertson, Masanori Ogawa, James M. Bugni, Laura E. Hays, Yang Chen, Yanping Wang, Piper M. Treuting, John A. Heddle, Robert E. Goldsby and Bradley D. Preston

PNAS October 6, 2009 vol. 106 no. 40 17101-17104

Publication Alert

C-Terminal Flap Endonuclease (rad27) Mutations: Lethal Interactions With a DNA Ligase I Mutation (cdc9-p) and Suppression by Proliferating Cell Nuclear Antigen (POL30) in Saccharomyces cerevisiae

Kenneth K. Karanja and Dennis M. Livingston

Genetics, Vol. 183, 63-78, September 2009

no postings this week

Publication Alert

Geminin Stabilizes Cdt1 during Meiosis in Xenopus Oocytes

Yadushyla Narasimhachar and Martine Coué

The Journal of Biological Chemistry, 284, 27235-27242.

Publication Alert

Assembly of the Cdc45-Mcm2–7-GINS complex in human cells requires the Ctf4/And-1, RecQL4, and Mcm10 proteins

Jun-Sub Ima, Sang-Hee Kia, Andrea Farinab, Dong-Soo Junga, Jerard Hurwitz and Joon-Kyu Lee

PNAS September 15, 2009 vol. 106 no. 37 15628-15632

Publication Alert

CTG/CAG Repeat Instability Is Modulated by the Levels of Human DNA Ligase I and Its Interaction with Proliferating Cell Nuclear AntigenA DISTINCTION BETWEEN REPLICATION AND SLIPPED-DNA REPAIR

Arturo López Castel, Alan E. Tomkinson and Christopher E. Pearson

The Journal of Biological Chemistry, 284, 26631-26645.

Publication Alert

Identification of a novel, widespread, and functionally important PCNA-binding motif

Karin M. Gilljam, Emadoldin Feyzi, Per A. Aas, Mirta M.L. Sousa, Rebekka Müller, Cathrine B. Vågbø, Tara C. Catterall, Nina B. Liabakk, Geir Slupphaug, Finn Drabløs, Hans E. Krokan, and Marit Otterlei

The Journal of Cell Biology, Vol. 186, No. 5, 645-654

Publication Alert

The Effect of Replication Initiation on Gene Amplification in the rDNA and Its Relationship to Aging

Austen R.D. Ganley, Satoru Ide, Kimiko Saka and Takehiko Kobayashi

Molecular Cell, Volume 35, Issue 5, 683-693, 11 September 2009

Publication Alert

Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase

Michael K Swan, Robert E Johnson, Louise Prakash, Satya Prakash & Aneel K Aggarwal

Nature Structural & Molecular Biology 16, 979 - 986 (2009)

Publication Alert

Novel DNA Binding Properties of the Mcm10 Protein from Saccharomyces cerevisiae

Shlomo Eisenberg, George Korza, John Carson, Ivan Liachko, and Bik-Kwoon Tye

J. Biol. Chem., Vol. 284, Issue 37, 25412-25420, September 11, 2009

Publication Alert

Pif1 Helicase Lengthens Some Okazaki Fragment Flaps Necessitating Dna2 Nuclease/Helicase Action in the Two-nuclease Processing Pathway

Jason E. Pike, Peter M. J. Burgers, Judith L. Campbell, and Robert A. Bambara

J. Biol. Chem., Vol. 284, Issue 37, 25170-25180, September 11, 2009

Publication Alert

DiaA Dynamics Are Coupled with Changes in Initial Origin Complexes Leading to Helicase Loading

Kenji Keyamura, Yoshito Abe, Masahiro Higashi, Tadashi Ueda, and Tsutomu Katayama

J. Biol. Chem., Vol. 284, Issue 37, 25038-25050, September 11, 2009

Publication Alert

Divergent S Phase Checkpoint Activation Arising from Prereplicative Complex Deficiency Controls Cell Survival

Eric Lau, Gary G. Chiang, Robert T. Abraham, and Wei Jiang

Vol. 20, Issue 17, 3953-3964, September 1, 2009

Publication Alert

Interaction of Human DNA Polymerase α and DNA Polymerase I from Bacillus stearothermophilus with Hypoxanthine and 8-Oxoguanine Nucleotides

Jennifer N. Patro, Milan Urban and Robert D. Kuchta

Biochemistry, 2009, 48 (34), pp 8271–8278

Publication Alert

Essential global role of CDC14 in DNA synthesis revealed by chromosome underreplication unrecognized by checkpoints in cdc14 mutants

Stanimir Duleva, Christelle de Renty, Rajvi Mehta, Ivan Minkov, Etienne Schwob and Alexander Strunnikov

PNAS August 25, 2009 vol. 106 no. 34 14466-14471

Publication Alert

Physical Interactions between Mcm10, DNA, and DNA Polymerase

Eric M. Warren1, Hao Huang, Ellen Fanning, Walter J. Chazin, and Brandt F. Eichman

J. Biol. Chem., Vol. 284, Issue 36, 24662-24672, September 4, 2009

Publication Alert

The Direct Binding of Mrc1, a Checkpoint Mediator, to Mcm6, a Replication Helicase, Is Essential for the Replication Checkpoint against Methyl Methanesulfonate-Induced Stress

Makiko Komata, Masashige Bando, Hiroyuki Araki, and Katsuhiko Shirahige

Molecular and Cellular Biology, September 2009, p. 5008-5019, Vol. 29, No. 18

Publication Alert

Prediction of and Experimental Support for the Three-Dimensional Structure of Replication Protein A

Jonathan Eric Nuss, Deacon John Sweeney and Gerald Michael Alter

Biochemistry, 2009, 48 (33), pp 7892–7905

no postings this week

Publication Alert

Replisome progression complex links DNA replication to sister chromatid cohesion in Xenopus egg extracts

Hiroshi Tanaka, Yumiko Kubota, Tsuyoshi Tsujimura, Maya Kumano, Hisao Masai and Haruhiko Takisawa

Genes to Cells Volume 14 Issue 8, Pages 949 – 963

Publication Alert

Replisome structure and conformational dynamics underlie fork progression past obstacles

Nina Y Yaoa and Mike O’Donnell

Current Opinion in Cell BiologyVolume 21, Issue 3, June 2009, Pages 336-343

Publication Alert

Inactivating pentapeptide insertions in the fission yeast replication factor C subunit Rfc2 cluster near the ATP-binding site and arginine finger motif

Fiona C. Gray, Kathryn A. Whitehead, and Stuart A. MacNeill

Volume 276 Issue 17, Pages 4803 – 4813

Publication Alert

A model for the spatiotemporal organization of DNA replication in Saccharomyces cerevisiae

T. W. Spiesser, E. Klipp and Matteo Barberis

MGG Volume 282, Number 1 / July, 2009

Publication Alert

The dual role of autonomously replicating sequences as origins of replication and as silencers

Muhammad Attiq Rehman and Krassimir Yankulov

Current Genetics Volume 55, Number 4 / August, 2009

Publication Alert

Physical Interaction between Replication Protein A (RPA) and MRN: Involvement of RPA2 Phosphorylation and the N-Terminus of RPA1

Greg G. Oakley, Kristin Tillison, Stephen A. Opiyo, Jason G. Glanzer, Jeffrey M. Horn and Steve M. Patrick

Biochemistry, 2009, 48 (31), pp 7473–748

Publication Alert

Mrc1 phosphorylation in response to DNA replication stress is required for Mec1 accumulation at the stalled fork

Maria L. Naylora, Ju-mei Li, Alex J. Osborn and Stephen J. Elledge

PNAS August 4, 2009 vol. 106 no. 31 12765-12770

Publication Alert

The 3'-Flap Pocket of Human Flap Endonuclease 1 Is Critical for Substrate Binding and Catalysis

L. David Finger, M. Suzette Blanchard, Carla A. Theimer, Blanka Sengerova, Purnima Singh, Valerie Chavez, Fei Liu, Jane A. Grasby, and Binghui Shen

J. Biol. Chem., Vol. 284, Issue 33, 22184-22194, August 14, 2009

Publication Alert

A biochemically active MCM-like helicase in Bacillus cereus

Martin Samuels, Gaurav Gulati, Jae-Ho Shin, Rejoice Opara, Elizabeth McSweeney, Matt Sekedat, Stephen Long, Zvi Kelman and David Jeruzalmi

Nucleic Acids Research, 2009, Vol. 37, No. 13 4441-4452

Publication Alert

Phosphorylation of Mcm2 by Cdc7 Promotes Pre-replication Complex Assembly during Cell-Cycle Re-entry

Li-Chiou Chuang1,Leonardo K. Teixeira,James A. Wohlschlegel1,Martha Henze1,John R. Yates,Juan Méndez and Steven I. Reed

Molecular Cell, Volume 35, Issue 2, 206-216, 31 July 2009

Publication Alert

ATP Binding and Hydrolysis by Mcm2 Regulate DNA Binding by Mcm Complexes

Brent E. Stead, Catherine D. Sorbara, a, Christopher J. Brand and Megan J. Davey

Journal of Molecular Biology Volume 391, Issue 2, 14 August 2009, Pages 301-313

Publication Alert

Roles of Human AND-1 in Chromosome Transactions in S Phase

Naoko Yoshizawa-Sugata and Hisao Masai

J. Biol. Chem., Vol. 284, Issue 31, 20718-20728, July 31, 2009

Publication Alert

Human Replication Protein A−Rad52−Single-Stranded DNA Complex: Stoichiometry and Evidence for Strand Transfer Regulation by Phosphorylation

Biochemistry, 2009, 48 (28), pp 6633–6643

Publication Alert

Human Dna2 Is a Nuclear and Mitochondrial DNA Maintenance Protein

Julien P. Duxin, Benjamin Dao, Peter Martinsson, Nina Rajala, Lionel Guittat, Judith L. Campbell, Johannes N. Spelbrink, and Sheila A. Stewart

Molecular and Cellular Biology, August 2009, p. 4274-4282, Vol. 29, No. 15

Publication Alert

Microfluidic-assisted analysis of replicating DNA molecules
Julia M Sidorova, Nianzhen Li, David C Schwartz, Albert Folch & Raymond J Monnat Jr

Nature Protocols 4, - 849 - 861 (2009)

Publication Alert

3D architecture of DNA Pol reveals the functional core of multi-subunit replicative polymerases

Sebastian Klinge, Rafael Núñez-Ramírez, Oscar Llorca and Luca Pellegrini

The EMBO Journal (2009) 28, 1978 – 1987

Publication Alert

Interactions between Swi1-Swi3, Mrc1 and S phase kinase, Hsk1 may regulate cellular responses to stalled replication forks in fission yeasthttp://www.blogger.com/img/blank.gif

Michie Shimmoto, Seiji Matsumoto, Yukari Odagiri, Eishi Noguchi, Paul Russell and Hisao Masai

Genes to Cells Volume 14 Issue 6, Pages 669 – 682

Publication Alert

Ctf4 coordinates the progression of helicase and DNA polymerase α

Hirokazu Tanaka , Yuki Katou, Masaru Yagura, Katsuya Saitoh, Takehiko Itoh, Hiroyuki Araki, Masashige Bando and Katsuhiko Shirahige

Genes to Cells Volume 14 Issue 7, Pages 807 – 820

Publication Alert

The impact of nucleosome positioning on the organization of replication origins in eukaryotes

Shanye Yin, Wenjun Deng, Landian Hu, and Xiangyin Kong

Biochemical and Biophysical Research Communications Volume 385, Issue 3, 31 July 2009, Pages 363-368

Publication Alert

Chromatin dynamics is correlated with replication timing

Artem Pliss, Kishore Malyavantham, Sambit Bhattacharya, Michael Zeitz and Ronald Berezney

chromosoma Volume 118, Number 4 / August, 2009

Publication Alert

Chromatin assembly controls replication fork stability

Marta Clemente-Ruiz & Félix Prado

EMBO reports 10, 7, 790–796 (2009)

Publication Alert

Proliferating Cell Nuclear Antigen Is Protected from Degradation by Forming a Complex with MutT Homolog2

Yu Yu, Jian-Ping Cai, Bo Tu, Lipeng Wu, Ying Zhao, Xiangyu Liu, Lian Li, Michael A. McNutt, Jingnan Feng, Qihua He, Yang Yang, Haiying Wang, Mutsuo Sekiguchi, and Wei-Guo Zhu

J. Biol. Chem., Vol. 284, Issue 29, 19310-19320, July 17, 2009

Publication Alert

Docking of a Specialized PIP Box onto Chromatin-Bound PCNA Creates a Degron for the Ubiquitin Ligase CRL4Cdt2

Courtney G. Havens and Johannes C. Walter

Molecular Cell, Volume 35, Issue 1, 93-104, 10 July 2009

Publication Alert

dRecQ4 Is Required for DNA Synthesis and Essential for Cell Proliferation in Drosophila

Yanjuan Xu, Zhiyong Lei, Hai Huang, Wen Dui, Xuehong Liang, Jun Ma1, Renjie Jiao

PLoS ONE 4(7): e6107

Publication Alert

Functional analysis of an Orc6 mutant in Drosophila

Maxim Balasov, Richard P. H. Huijbregts and Igor Chesnokov

PNAS June 30, 2009 vol. 106 no. 26 10672-10677

Publication Alert

Highly Transcribed RNA Polymerase II Genes Are Impediments to Replication Fork Progression in Saccharomyces cerevisiae

Anna Azvolinsky,Paul G. Giresi,Jason D. Lieb,,andVirginia A. Zakian

Molecular Cell, Volume 34, Issue 6, 722-734, 26 June 2009

Publication Alert

c-Myc Accelerates S-Phase and Requires WRN to Avoid Replication Stress

Kristin Robinson, Nichaya Asawachaicharn, Denise A. Galloway, Carla Grandor

PLoS ONE 4(6): e5951

Publication Alert

Yeast Rev1 protein promotes complex formation of DNA polymerase ζ with Pol32 subunit of DNA polymerase δ

Narottam Acharya, Robert E. Johnson, Vincent Pagès, Louise Prakash and Satya Prakash

PNAS June 16, 2009 vol. 106 no. 24 9631-9636

Publication Alert

Proliferating Cell Nuclear Antigen Uses Two Distinct Modes to Move along DNA

Anna B. Kochaniak, Satoshi Habuchi, Joseph J. Loparo, Debbie J. Chang, Karlene A. Cimprich, Johannes C. Walter, and Antoine M. van Oijen

J. Biol. Chem., Vol. 284, Issue 26, 17700-17710, June 26, 2009

Publication Alert

Universal Temporal Profile of Replication Origin Activation in Eukaryotes

Arach Goldar, Marie-Claude Marsolier-Kergoat, Olivier Hyrien

PLoS ONE 4(6): e5899

Publication Alert

H3 K36 Methylation Helps Determine the Timing of Cdc45 Association with Replication Origins

Fiona Pryde, Devanshi Jain, Alastair Kerr, Rebecca Curley, Francesca Romana Mariotti, Maria Vogelauer

PLoS ONE 4(6): e5882

Publication Alert

Selective Killing of Cancer Cells by Suppression of Geminin Activity

Wenge Zhu and Melvin L. DePamphilis

Cancer Research 69, 4870, June 1, 2009

Publication Alert

XRCC1 interacts with the p58 subunit of DNA Pol -primase and may coordinate DNA repair and replication during S phase

Nicolas Lévy, Maren Oehlmann, François Delalande, Heinz Peter Nasheuer, Alain Van Dorsselaer, Valérie Schreiber, Gilbert de Murcia, Josiane Ménissier-de Murcia, Domenico Maiorano, and Anne Bresson

Nucleic Acids Research, 2009, Vol. 37, No. 10 3177-3188

no postings this week

1.6.9

Publication Alert

Proofreading exonuclease activity of human DNA polymerase and its effects on lesion-bypass DNA synthesis

Ruzaliya Fazlieva, Cynthia S. Spittle, Darlene Morrissey, Harutoshi Hayashi, Hong Yan and Yoshihiro Matsumoto

Nucleic Acids Research, 2009, Vol. 37, No. 9 2854-2866

Publication Alert

Schizosaccharomyces pombe Rtf2 mediates site-specific replication termination by inhibiting replication restart

Takabumi Inagawa, Tomoko Yamada-Inagawa, Trevor Eydmann, I. Saira Mian, Teresa S. Wang and Jacob Z. Dalgaard

PNAS May 12, 2009 vol. 106 no. 19 7927-7932

Publication Alert

Archaeal eukaryote-like Orc1/Cdc6 initiators physically interact with DNA polymerase B1 and regulate its functions

Lu Zhang, Lei Zhang, Yi Liu, Shifan Yang, Chunhui Gao, Hongchao Gong, Ying Feng and Zheng-Guo He

PNAS May 12, 2009 vol. 106 no. 19 7792-7797

Publication Alert

Coordinated Activation of the Origin Licensing Factor CDC6 and CDK2 in Resting Human Fibroblasts Expressing SV40 Small T Antigen and Cyclin E

Elena Sotillo, Judit Garriga, Amol Padgaonkar, Alison Kurimchak, Jeanette Gowen Cook, and Xavier Graña

J. Biol. Chem., Vol. 284, Issue 21, 14126-14135, May 22, 2009

Publication Alert

Suppression of a DNA polymerase δ mutation by the absence of the high mobility group protein Hmo1 in Saccharomyces cerevisiae

Haeyoung Kim and Dennis M. Livingston

Current genetics 55 127-138

Publication Alert

Unwinding the structure and function of the archaeal MCM helicase

Nozomi Sakakibara, Lori M. Kelman and Zvi Kelman

Molecular Microbiology Volume 72 Issue 2, Pages 286 – 296

Geminin is partially localized to the centrosome and plays a role in proper centrosome duplication

Fei Lu, Rongfeng Lan, Hongyin Zhang, Qing Jiang and Chuanmao Zhang

Biology of the Cell (2009) 101, (273–285)

Publication Alert

Mammalian MCM Loading in Late-G1 Coincides with Rb Hyperphosphorylation and the Transition to Post-Transcriptional Control of Progression into S-Phase

Piyali Mukherjee, Thinh V. Cao, Sherry L. Winter, Mark G. Alexandrow

PLoS ONE 4(5): e5462.

Publication Alert

Specific function of phosphoinositide 3-kinase beta in the control of DNA replication

Miriam Marqués, Amit Kumar, Ana M. Poveda, Susana Zuluaga, Carmen Hernández,
Shaun Jackson, Philippe Pasero and Ana C. Carrera

PNAS May 5, 2009 vol. 106 no. 18 7525-7530

Publication Alert

Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae

Simon R.V. Knott, Christopher J. Viggiani, Simon Tavaré and Oscar M. Aparicio

Genes & Dev. 2009. 23: 1077-1090

Publication Alert

The Minichromosome Maintenance Proteins 2-7 (MCM2-7) Are Necessary for RNA Polymerase II (Pol II)-mediated Transcription

Marylynn Snyder, Xin-Yun Huang, and J. Jillian Zhang

J. Biol. Chem., Vol. 284, Issue 20, 13466-13472, May 15, 2009

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4.5.09

Publication Alert

Mechanism of ATP-Driven PCNA Clamp Loading by S. cerevisiae RFC

Siying Chen, Mikhail K. Levin, Miho Sakato, Yayan Zhou and Manju M. Hingorani

Journal of Molecular Biology Volume 388, Issue 3, 8 May 2009, Pages 431-442

Publication Alert

Essential functions of the 32 kDa subunit of yeast replication protein A

Anne M. Dickson, Yulia Krasikova, Pavel Pestryakov, Olga Lavrik and Marc S. Wold

Nucleic Acids Research, 2009, Vol. 37, No. 7 2313-2326

Publication Alert

Replication initiation complex formation in the absence of nuclear function in Xenopus

Liliana Krasinska and Daniel Fisher

Nucleic Acids Research, 2009, Vol. 37, No. 7 2238-2248

Publication Alert

The human GINS complex associates with Cdc45 and MCM and is essential for DNA replication

Tomás Aparicio, Emmanuelle Guillou, Javier Coloma, Guillermo Montoya and Juan Méndez

Nucleic Acids Research, 2009, Vol. 37, No. 7 2087-2095

Publication Alert

The MRX complex stabilizes the replisome independently of the S phase checkpoint during replication stress

Mireille Tittel-Elmer, Constance Alabert, Philippe Pasero & Jennifer A Cobb

The EMBO Journal (2009) 28, 1142 – 1156

Publication Alert

Differential regulation of homologous recombination at DNA breaks and replication forks by the Mrc1 branch of the S-phase checkpoint

Constance Alabert1, Julien N Bianco1 & Philippe Pasero

The EMBO Journal (2009) 28, 1131 – 1141

Publication Alert

ReplicationDomain: a visualization tool and comparative database
for genome-wide replication timing data

NodinWeddington, AlexanderStuy, IchiroHiratani, TyroneRyba, TomokiYokochi and David M Gilbert

BMC Bioinformatics 2008, 9:530

Publication Alert

Transcription Initiation Activity Sets Replication Origin Efficiency in Mammalian Cells

Joana Sequeira-Mendes, Ramón Díaz-Uriarte, Anwyn Apedaile, Derek Huntley, Neil Brockdorf, María Gómez

PLoS Genet 5(4): e1000446

Publication Alert

Replicon Dynamics, Dormant Origin Firing, and Terminal Fork Integrity after Double-Strand Break Formation

Ylli Doksani,Rodrigo Bermejo,Simona Fiorani,James E. Haber andMarco Foiani

Cell, Volume 137, Issue 2, 247-258, 09 April 2009

Publication Alert

Acetylation/Deacetylation Modulates the Stability of DNA Replication Licensing Factor Cdt1

Michele A. Glozak and Edward Seto

J. Biol. Chem., Vol. 284, Issue 17, 11446-11453,

Publication Alert

Differential arrival of leading and lagging strand DNA polymerases at fission yeast telomeres

Bettina A Moser, Lakxmi Subramanian, Ya-Ting Chang, Chiaki Noguchi, Eishi Noguchi & Toru M Nakamura

The EMBO Journal (2009) 28, 810 – 820

Publication Alert

Antics at the telomere: uncoupled polymerases solve the end replication problem

Carolyn M Price

The EMBO Journal (2009) 28, 795 – 796

Publication Alert

The origin recognition complex protein family

Bernard P Duncker , Igor N Chesnokov and Brendan J McConkey

Genome Biology 2009, 10:214

Publication Alert

Structural Basis for Novel Interactions between Human Translesion Synthesis Polymerases and Proliferating Cell Nuclear Antigen

Asami Hishiki, Hiroshi Hashimoto, Tomo Hanafus, Keijiro Kamei, Eiji Ohashi, Toshiyuki Shimizu, Haruo Ohmori, and Mamoru Sato

J. Biol. Chem., Vol. 284, Issue 16, 10552-10560, April 17, 2009

Publication Alert

Human Replication Factor C Stimulates Flap Endonuclease 1

Il-taeg Cho, Do-hyung Kim, Young-Hoon Kang, Chul-Hwan Lee, Tamir Amangyelid, Tuan Anh Nguyen, Jerard Hurwitz, and Yeon-Soo Seo

J. Biol. Chem., Vol. 284, Issue 16, 10387-10399, April 17, 2009

Publication Alert

The MPH1 Gene of Saccharomyces cerevisiae Functions in Okazaki Fragment Processing

Young-Hoon Kang, Min-Jung Kang, Jeong-Hoon Kim, Chul-Hwan Lee, Il-taeg Cho, Jerard Hurwitz, and Yeon-Soo Seo

J. Biol. Chem., Vol. 284, Issue 16, 10376-10386, April 17, 2009

Publication Alert

Acetylation by GCN5 regulates CDC6 phosphorylation in the S phase of the cell cycle

Roberta Paolinelli, Ramiro Mendoza-Maldonado, Anna Cereseto & Mauro Giacca

Nature Structural & Molecular Biology 16, 412 - 420 (2009)

Publication Alert

Human mutation rate associated with DNA replication timing

John A Stamatoyannopoulos, Ivan Adzhubei, Robert E Thurman, Gregory V Kryukov,
Sergei M Mirkin & Shamil R Sunyaev

Nature Genetics 41, 393 - 395 (2009)

Publication Alert

The heterochromatin protein Swi6/HP1 activates replication origins at the pericentromeric region and silent mating-type locus

Makoto T. Hayashi, Tatsuro S. Takahashi, Takuro Nakagawa, Jun-ichi Nakayama & Hisao Masukata

Nature Cell Biology 11, 357 - 362 (2009)

Publication Alert

Factors Affecting the Diversity of DNA Replication Licensing Control in Eukaryotes

Lucy S. Drury andJohn F.X. Diffley

Current Biology, Volume 19, Issue 6, 530-535, 12 March 2009

Publication Alert

A model for DNA replication showing how dormant origins safeguard against replication fork failure


J Julian Blow & Xin Quan Ge

EMBO reports 10, 4, 406–412 (2009)

Publication Alert

p300-mediated acetylation of the Rothmund-Thomson-syndrome gene product RECQL4 regulates its subcellular localization

Tobias Dietschy, Igor Shevelev, Javier Pena-Diaz, Daniela Hühn, Sandra Kuenzle, Raymond Mak, Mohammad Fahad Miah, Daniel Hess, Monika Fey, Michael O. Hottiger, Pavel Janscak and Igor Stagljar

Journal of Cell Science 122, 1258-1267 (2009)

Publication Alert

Asynchronous Replication and Autosome-Pair Non-Equivalence in Human Embryonic Stem Cells

Devkanya Dutta, Alexander W. Ensminger, Jacob P. Zucker, Andrew Chess

PLoS ONE 4(3): e4970.

Publication Alert

Mechanism of replication machinery assembly as revealed by the DNA ligase–PCNA–DNA complex architecture

Kouta Mayanagia, Shinichi Kiyonari, Mihoko Saito, Tsuyoshi Shiraid Yoshizumi Ishino and Kosuke Morikawa

PNAS March 24, 2009 vol. 106 no. 12 4647-4652

Publication Alert

TopBP1 and DNA polymerase- directly recruit the 9-1-1 complex to stalled DNA replication forks

Shan Yan and W. Matthew Michael

The Journal of Cell Biology, Vol. 184, No. 6, 793-804

Publication Alert

Phosphorylation of Human DNA Ligase I Regulates Its Interaction with Replication Factor C and Its Participation in DNA Replication and DNA Repair

Sangeetha Vijayakumar, Barbara Dziegielewska, David S. Levin, Wei Song, Jinhu Yin, Austin Yang, Yoshihiro Matsumoto, Vladimir P. Bermudez, Jerard Hurwitz, and Alan E. Tomkinson

Molecular and Cellular Biology, April 2009, p. 2042-2052, Vol. 29, No. 8

Publication Alert

DNA Ligase I Deficiency Leads to Replication-Dependent DNA Damage and Impacts Cell Morphology without Blocking Cell Cycle Progression

Samuela Soza, Valentina Leva, Riccardo Vago, Giovanni Ferrari, Giuliano Mazzini, Giuseppe Biamonti, and Alessandra Montecucco

Molecular and Cellular Biology, April 2009, p. 2032-2041, Vol. 29, No. 8

Publication Alert

ATP Hydrolysis and DNA Binding Confer Thermostability on the MCM Helicase

Nozomi Sakakibara, Frederick P. Schwarz and Zvi Kelman

Biochemistry, 2009, 48 (11), pp 2330–2339

Publication Alert

Timeless Maintains Genomic Stability and Suppresses Sister Chromatid Exchange during Unperturbed DNA Replication

Karen A. Urtishak, Kevin D. Smith, Rebecca A. Chanoux, Roger A. Greenberg, F. Brad Johnson, and Eric J. Brown

J. Biol. Chem., Vol. 284, Issue 13, 8777-8785, March 27, 2009


Publication Alert

Significance of the Dissociation of Dna2 by Flap Endonuclease 1 to Okazaki Fragment Processing in Saccharomyces cerevisiae

Jason A. Stewart, Judith L. Campbell, and Robert A. Bambara

J. Biol. Chem., Vol. 284, Issue 13, 8283-8291, March 27, 2009

Publication Alert

The Werner Syndrome Helicase/Exonuclease Processes Mobile D-Loops through Branch Migration and Degradation

Patricia L. Opresko, Gregory Sowd, Hong Wang

PLoS ONE 4(3): e4825.

Publication Alert

Positive regulation of minichromosome maintenance gene expression, DNA replication, and cell transformation by a plant retinoblastoma gene

Paolo A. Sabelli, George Hoerster, Lucina E. Lizarraga, Sara W. Brown, William J. Gordon-Kamm and Brian A. Larkins

PNAS March 10, 2009 vol. 106 no. 10 4042-4047

Publication Alert

Cooperative activation of the ATR checkpoint kinase by TopBP1 and damaged DNA

Jun-Hyuk Choi, Laura A. Lindsey-Boltz and Aziz Sancar

Nucleic Acids Research, 2009, Vol. 37, No. 5 1501-1509

Publication Alert

Cyclin A–Cdk1 regulates the origin firing program in mammalian cells

Yuko Katsuno, Ayumi Suzuki, Kazuto Sugimura, Katsuzumi Okumura, Doaa H. Zineldeen, Midori Shimada, Hiroyuki Niida, Takeshi Mizuno, Fumio Hanaokac and Makoto Nakanishia

PNAS March 3, 2009 vol. 106 no. 9 3184-3189

Publication Alert

Incorporation into the prereplicative complex activates the Mcm2–7 helicase for Cdc7–Dbf4 phosphorylation

Laura I. Francis, John C.W. Randell, Thomas J. Takara, Lilen Uchima, and Stephen P. Bell,

Genes & Dev. 2009. 23: 643-654

Publication Alert

Chromatin state marks cell-type- and gender-specific replication of the Drosophila genome

Michaela Schwaiger, Michael B. Stadler, Oliver Bell, Hubertus Kohler, Edward J. Oakeley and Dirk Schübeler,

Genes & Dev. 2009. 23: 589-601

Publication Alert

Establishing the Program of Origin Firing during S Phase in Fission Yeast

Pei-Yun Jenny Wu,andPaul Nurse

Cell, Volume 136, Issue 5, 852-864, 6 March 2009

Publication Alert

In DNA Replication, the Early Bird Catches the Worm

Erik Boye,andBeáta Grallert

Cell, Volume 136, Issue 5, 812-814, 6 March 2009

Publication Alert

ORC proteins: marking the start

Dale B Wigley

Current Opinion in Structural Biology Volume 19, Issue 1, February 2009, Pages 72-78

Publication Alert

FEN1 contributes to telomere stability in ALT-positive tumor cells

A Saharia and S A Stewart

Oncogene (2009) 28, 1162–1167

Publication Alert

ATR (AT mutated Rad3 related) activity stabilizes Cdc6 and delays G2/M-phase entry during hydroxyurea-induced S-phase arrest of HeLa cells

Linhua Liu, , Jae Hyuk Choi, Hyungshin Yim, Joon Seok Choi, Byoung Duck Park5, Seung Ju Cho, and Seung Ki Lee

The International Journal of Biochemistry & Cell Biology 41, Issue 6, June 2009, 1410-1420

Publication Alert

Mcm10 Mediates the Interaction Between DNA Replication and Silencing Machineries

Ivan Liachko and Bik K. Tye

Genetics, Vol. 181, 379-391, February 2009

Publication Alert

Yeast telomere capping protein Stn1 overrides DNA replication control through the S phase checkpoint

Hovik J. Gasparyana, Ling Xua, Ruben C. Petreacaa, Alexandra E. Rexb, Vanessa Y. Smalla, Neil S. Bhogala, Jeffrey A. Juliusa, Tariq H. Warsia, Jeff Bachanta, Oscar M. Apariciob and Constance I. Nugent

PNAS February 17, 2009 vol. 106 no. 7 2206-2211

Publication Alert

A DNA Polymerase-·Primase Cofactor with Homology to Replication Protein A-32 Regulates DNA Replication in Mammalian Cells

Darren E. Castee, Shunhui Zhuang, Ying Zeng, Fred W. Perrino, Gerry R. Boss, Mehran Goulian, and Renate B. Pilz

J. Biol. Chem., Vol. 284, Issue 9, 5807-5818

Publication Alert

Mutations in Subdomain B of the Minichromosome Maintenance (MCM) Helicase Affect DNA Binding and Modulate Conformational Transitions

Elizabeth R. Jenkinson, Alessandro Costa, Andrew P. Leech, Ardan Patwardhan, Silvia Onesti, and James P. J. Chong

J. Biol. Chem., Vol. 284, Issue 9, 5654-5661, February 27, 2009

Publication Alert

BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation

Jaya G Yodh, Benjamin C Stevens, Radhakrishnan Kanagaraj, Pavel Janscak & Taekjip Ha

The EMBO Journal (2009) 28, 405 – 416

Publication Alert

Arabidopsis ORC1 is a PHD-containing H3K4me3 effector that regulates transcription

María de la Paz Sanchez and Crisanto Gutierrez

PNAS February 10, 2009 vol. 106 no. 6 2065-2070

Publication Alert

The Transition of Closely Opposed Lesions to Double-Strand Breaks during Long-Patch Base Excision Repair Is Prevented by the Coordinated Action of DNA Polymerase and Rad27/Fen1

Wenjian Ma, Vijayalakshmi Panduri, Joan F. Sterling, Bennett Van Houten, Dmitry A. Gordenin, and Michael A. Resnick

Molecular and Cellular Biology, March 2009, p. 1212-1221, Vol. 29, No. 5

Publication Alert

GINS Inactivation Phenotypes Reveal Two Pathways for Chromatin Association of Replicative and DNA Polymerases in Fission Yeast

Chen Chun Pai, Ignacio García,, Shao Win Wang, Sue Cotterill, Stuart A. MacNeill, and Stephen E. Kearsey

Vol. 20, Issue 4, 1213-1222, February 15, 2009

Publication Alert

An Alternative Form of Replication Protein A Prevents Viral Replication in Vitro

Aaron C. Mason, Stuart J. Haring, John M. Pryor, Cathy A. Staloch, Tze Fei Gan, and Marc S. Wold

J. Biol. Chem., Vol. 284, Issue 8, 5324-5331,

Publication Alert

Replisome stalling and stabilization at CGG repeats, which are responsible for chromosomal fragility

Irina Voineagu, Christine F Surka, Alexander A Shishkin, Maria M Krasilnikova & Sergei M Mirkin

Nature Structural & Molecular Biology 16, 226 - 228 (2009)

Publication Alert

DNA and heparin chaperone the refolding of purified recombinant replication protein A subunit 1 from Leishmania amazonensis

C.B.B. Lira, K.E. Gui, A.M. Perez, R.C.V. da Silveira, L.M. Gava, C.H.I. Ramos, and M.I.N. Cano,

Biochimica et Biophysica Acta (BBA) Volume 1790, Issue 2, February 2009, Pages 119-125

Publication Alert

The multi-replication protein A (RPA) system – a new perspective

Kengo Sakaguchi, Toyotaka Ishibashi, Yukinobu Uchiyama and Kazuki Iwabata

FEBS Journal Volume 276 Issue 4, Pages 943 – 963

Publication Alert

Organization of human replicon: Singles or zipping couples?

Anna Ligasová, Ivan Raška and Karel Kobern

Journal of Structural Biology Volume 165, Issue 3, March 2009, Pages 204-213

Publication Alert

Orc1 Controls Centriole and Centrosome Copy Number in Human Cells

Adriana S. Hemerly Supriya G. Prasanth, Khalid Siddiqui, Bruce Stillman

Science 6 February 2009:
Vol. 323. no. 5915, pp. 789 – 793

Publication Alert

Differential targeting of Tetrahymena ORC to ribosomal DNA and non-rDNA replication origins

Taraka R Donti, Shibani Datta1, Pamela Y Sandova & Geoffrey M Kapler

The EMBO Journal (2009) 28, 223 – 233

Publication Alert

Polymerase Dynamics at the Eukaryotic DNA Replication Fork

Peter M. J. Burgers

J. Biol. Chem., Vol. 284, Issue 7, 4041-4045, February 13, 2009


Publication Alert

Intersubunit allosteric communication mediated by a conserved loop in the MCM helicase

Elizabeth R. Barry, Janet E. Lovett, Alessandro Costa, Susan M. Lea and Stephen D. Bell

PNAS January 27, 2009 vol. 106 no. 4 1051-1056

Publication Alert

Stwl Modifies Chromatin Compaction and Is Required to Maintain DNA Integrity in the Presence of Perturbed DNA Replication

Xia Yi, Hilda I. de Vries, Katarzyna Siudeja, Anil Rana, Willy Lemstra, Jeanette F. Brunsting, Rob M. Kok, Yvo M. Smulders, Matthias Schaefer, Freark Dijk, Yongfeng Shang, Bart J.L. Eggen, Harm H. Kampinga, and Ody C.M. Sibon*

Vol. 20, Issue 3, 983-994, February 1, 2009

Publication Alert

Human Flap Endonuclease I Is in Complex with Telomerase and Is Required for Telomerase-mediated Telomere Maintenance

Shilpa Sampathi, Amruta Bhusari, Binghui Shen, and Weihang Chai,

J. Biol. Chem., Vol. 284, Issue 6, 3682-3690, February 6, 2009

Publication Alert

Linkage between Phosphorylation of the Origin Recognition Complex and Its ATP Binding Activity in Saccharomyces cerevisiae

Masaki Makise, Masaya Takehara, Akihiko Kuniyasu, Nanako Matsui, Hitoshi Nakayama, and Tohru Mizushima

J. Biol. Chem., Vol. 284, Issue 6, 3396-3407, February 6, 2009

Publication Alert

DNA damage alters DNA polymerase delta to a form that exhibits increased discrimination against modified template bases and mismatched primers

Xiao Meng, Yajing Zhou, Sufang Zhang, Ernest Y. C. Lee, David N. Frick and Marietta Y. W. T. Lee

Nucleic Acids Research, 2009, Vol. 37, No. 2 647-657

Publication Alert

Human CDT1 Associates with CDC7 and Recruits CDC45 to Chromatin during S Phase

Andrea Ballabeni, Raffaella Zamponi, Greta Caprara, Marina Melixetian, Sergio Bossi, Laura Masiero, and Kristian Helin

J. Biol. Chem., Vol. 284, Issue 5, 3028-3036, January 30, 2009


Publication Alert

Linker Histone Phosphorylation Regulates Global Timing of Replication Origin Firing

Christophe Thiriet and Jeffrey J. Hayes

J. Biol. Chem., Vol. 284, Issue 5, 2823-2829, January 30, 2009

Publication Alert

Replication forks, chromatin loops and dormant replication origins

J Julian Blow and Xin Quan Ge

Genome Biology 2008, 9:244

Publication Alert

DNA Polymerase δ Is Required for Early Mammalian Embryogenesis

Arikuni Uchimura1, Yuko Hidaka, Takahiro Hirabayashi, Masumi Hirabayashi, Takeshi Yagi

PLoS ONE 4(1): e4184.

Publication Alert

Dynamics of DNA replication loops reveal temporal control of lagging-strand synthesis

Samir M. Hamdan, Joseph J. Loparo, Masateru Takahashi, Charles C. Richardson &
Antoine M. van Oijen

Nature 457, 336-339 (15 January 2009)

Publication Alert

Role of the 2-Amino Group of Purines during dNTP Polymerization by Human DNA Polymerase α

Jennifer N. Patro, Milan Urban and Robert D. Kuchta

Biochemistry, 2009, 48 (1), pp 180–189

Publication Alert

Sic1-induced DNA rereplication during meiosis

Kara E. Sawarynski, Nicole A. Najor, Andrea C. Kepse, and George S. Brush

PNAS January 6, 2009 vol. 106 no. 1 232-237

Publication Alert

Initiation of New DNA Strands by the Herpes Simplex Virus-1 Primase-Helicase Complex and Either Herpes DNA Polymerase or Human DNA Polymerase

Nisha A. Cavanaugh and Robert D. Kuchta

J. Biol. Chem., Vol. 284, Issue 3, 1523-1532, January 16, 2009

Publication Alert

Evidence for direct contact between the RPA3 subunit of the human replication protein A and single-stranded DNA

Tonatiuh Romero Salas, Irina Petruseva, Olga Lavrik and Carole Saintomé,

Nucleic Acids Research, 2009, Vol. 37, No. 1 38-46

Publication Alert

Analysis of re-replication from deregulated origin licensing by DNA fiber spreading

Elizabeth S. Dorn, Paul D. Chastain, II, Jonathan R. Hall1 and Jeanette Gowen Cook

Nucleic Acids Research, 2009, Vol. 37, No. 1 60-69

Publication Alert

The Temporal Program of Chromosome Replication: Genomewide Replication in clb5 Saccharomyces cerevisiae

Heather J. McCune, Laura S. Danielson, Gina M. Alvino, David Collingwood, Jeffrey J. Delrow, Walton L. Fangman, Bonita J. Brewer and M. K. Raghuraman

Genetics, Vol. 180, 1833-1847, December 2008,

Publication Alert

Replication protein A and proliferating cell nuclear antigen coordinate DNA polymerase selection in 8-oxo-guanine repair

Giovanni Maga, Emmanuele Crespan, Ursula Wimmer, Barbara van Loon, Alessandra Amoroso, Chiara Mondello, Cristina Belgiovine, Elena Ferrari, Giada Locatelli, Giuseppe Villani, and Ulrich Hübscher

PNAS December 30, 2008 vol. 105 no. 52 20689-20694

Publication Alert

PARP-1 ensures regulation of replication fork progression by homologous recombination on damaged DNA

Kazuto Sugimura, Shin-ichiro Takebayashi, Hiroshi Taguchi, Shunichi Takeda, and Katsuzumi Okumura

The Journal of Cell Biology, Vol. 183, No. 7, 1203-1212

Publication Alert

Checkpoint-Dependent Regulation of Origin Firing and Replication Fork Movement in Response to DNA Damage in Fission Yeast

Sanjay Kumar and Joel A. Huberman

Molecular and Cellular Biology, January 2009, p. 602-611, Vol. 29, No. 2

Publication Alert

Recql5 Plays an Important Role in DNA Replication and Cell Survival after Camptothecin Treatment

Yiduo Hu, Xincheng Lu, Guangjin Zhou, Ellen L. Barnes, and Guangbin Luo

Vol. 20, Issue 1, 114-123, January 1, 2009